... well, you're being very vague here, what kind of missions ...?
If you have access to the .mis files, then if your mission starts with TAKEOFF, your engine will have to be started, if the mission starts with NORMFLY then it is airstart, and your engine won't have to be started and no take off of course ...
You can easily edit a mission file and add a TAKEOFF point, either by copying it from another mission starting from the same base, or by copying the LANDING line but of course renaming it TAKEOFF ...
Case N°1: with TAKEOFF:[MAIN]
MAP Northern_Africa_Jir_v3/load.ini
TIME 16.2
CloudType 1
CloudHeight 950.0
player RAF_No112SQN00
army 1
playerNum 0
[Wing]
RAF_No112SQNb00
RAF_No112SQN00
RAF_No614SQN00
[RAF_No112SQNb00]
Planes 4
OnlyAI 1
Skill 2
skin0 Tka Blank1 RAF Egypt 1940.bmp
skin1 Tka Blank1 RAF Egypt 1940.bmp
skin2 Tka Blank1 RAF Egypt 1940.bmp
skin3 Tka Blank1 RAF Egypt 1940.bmp
Class air.GLADIATOR2MOD
Fuel 100
weapons default
[RAF_No112SQNb00_Way]
TAKEOFF 821102.66 71051.76 0 0 &0 <== Takeoff line, so engine must be started NORMFLY 821094.15 71998.44 200.00 230.00 &0
NORMFLY 822993.79 72199.80 400.00 230.00 &0 F6
NORMFLY 824391.91 71004.39 500.00 230.00 &0 F6
NORMFLY 821980.01 66006.66 500.00 270.00 &0 F6
NORMFLY 769074.42 6612.45 500.00 270.00 &0 F6
NORMFLY 767524.69 4248.50 500.00 270.00 &0 F6
NORMFLY 767711.09 3501.66 500.00 270.00 &0 F6
NORMFLY 768981.81 999.30 400.00 230.00 &0 F6
NORMFLY 770755.07 160.94 300.00 230.00 &0 F6
NORMFLY 771984.81 118.54 200.00 230.00 &0 F6
NORMFLY 772205.79 660.99 200.00 230.00 &0 F6
LANDING 772224.31 1104.70 0 0 &0
Case N°2 airstart:[MAIN]
MAP Northern_Africa_Jir_v3/load.ini
TIME 15.200001
CloudType 0
CloudHeight 1200.0
player RAF_No112SQN00
army 1
playerNum 0
[Wing]
RAF_No112SQN00
RAF_No014SQN00
80Squadriglia00
RAF_No112SQN01
[RAF_No112SQN00]
Planes 4
Skill 2
skin0 Tka Blank1 RAF Egypt 1940.bmp
skin1 Tka Blank1 RAF Egypt 1940.bmp
skin2 Tka Blank1 RAF Egypt 1940.bmp
skin3 Tka Blank1 RAF Egypt 1940.bmp
Class air.GLADIATOR2MOD
Fuel 100
weapons default
[RAF_No112SQN00_Way]
NORMFLY 772190.92 5727.96 200.00 230.00 &0 F6
<== no takeoff line, so mission starts with engine started NORMFLY 720178.77 29925.35 2000.00 270.00 &0 F6
NORMFLY 638008.82 57605.93 2000.00 270.00 &0 F6
NORMFLY 614856.08 60237.64 1000.00 270.00 &0 F6
NORMFLY 593093.38 63059.60 500.00 270.00 &0 F6
NORMFLY 591991.17 65029.14 500.00 270.00 &0 F6
NORMFLY 592001.43 66026.82 500.00 270.00 &0 F6
NORMFLY 592990.31 66474.96 500.00 270.00 &0 F6
NORMFLY 594009.30 66461.69 500.00 270.00 &0 F6
LANDING 598175.94 66350.80 0 0 &0